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SRX3506164: GSM2899125: nkx_ctl_1; Homo sapiens; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2000) run: 41.3M spots, 4.2G bases, 1.7Gb downloads

Submitted by: NCBI (GEO)
Study: RNA sequencing of hPSC-derived cardiac progenitors and endocardium
show Abstracthide Abstract
We utilized a dual reporting hPSC line that identified cells expressing NKX2.5 and endothelal cells to characterize discrete milestones during cardiac and vascular differentiaiton. Comparing populations that express either or both reporters to human umbilical vein endothelial cells, we document a unique molecular phenotype in hPSC-derived endocardium that points toward an important role for Wnt signaling during vascular specification of cardiac progenitors. Overall design: Sequencing mRNA from biological triplicate samples of: 1) hPSC derivatives expressing NKX2.5 alone; 2) hPSC derivatives expressing NKX2.5 and endothelial markers; and 3) hPSC derivatives expressing only endothelial markers.
Sample: nkx_ctl_1
SAMN08234413 • SRS2783716 • All experiments • All runs
Organism: Homo sapiens
Library:
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Total RNA was isolated form cells using the Arcturus picoPure RNA isolation kit RNA libraries were prepared for sequencing using standard Illumina protocols
Experiment attributes:
GEO Accession: GSM2899125
Links:
Runs: 1 run, 41.3M spots, 4.2G bases, 1.7Gb
Run# of Spots# of BasesSizePublished
SRR641314941,271,7174.2G1.7Gb2018-01-23

ID:
4873140

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